doc. RNDr. Tomáš Mrkvička, Ph.D.

Publications

Textbooks:

Softwares:

Theoretical and methodological papers:

Applied papers:

  • Znachor, P., Nedoma, J., Hejzlar, J., Seďa, J., Komárková, J., Kolář, J., Mrkvička T., Boukal, D. (2020). Changing environmental conditions underpin long-term patterns of phytoplankton in a freshwater reservoir. Science of the Total Environment , 710, 135626.
  • Zdeněk, R., Losová, J., Mrkvička T. (2019), Determinants of land rent and its development in Czechia. Bulgarian Journal of Agricultural Science. National Centre for Agrarian Sciences. 25/6: 1114-1121.
  • Hönig V., Švec P., Marek L., Mrkvička T., Zubriková D., Wittmann M., Masař O., Szturcová D., Růžek D., Pfister K., Grubhoffer L. (2019), Model of Risk of Exposure to Lyme Borreliosis and Tick-Borne Encephalitis Virus-Infected Ticks in the Border Area of the Czech Republic (South Bohemia) and Germany (Lower Bavaria and Upper Palatinate). International Journal of Environmental Research and Public Health. 16: 1173
  • Jůza, T., Blabolil, P., Čech, M., Kubečka, J., Mrkvička, T., Říha, M., Sajdlová, Z., Vašek, M., Vejřík, L., Peterka, J. (2018), Spatial distribution of four freshwater fish species in different types of artificial European water bodies. Biologia. 73: 647
  • Žák, J. , Jůza, T. , Blabolil, P. , Baran, R. , Bartoň, D. , Draštík, V. , Frouzová, J. , Holubová, M. , Ketelaars, H. A., Kočvara, L. , Kubečka, J. , Mrkvička, T. , Muška, M. , Říha, M. , Sajdlová, Z. , Šmejkal, M. , Tušer, M. , Vašek, M. , Vejřík, L. , Vejříková, I. and Wagenvoort, A. J. (2018), Invasive round goby Neogobius melanostomus has sex‐dependent locomotor activity and is under‐represented in catches from passive fishing gear compared with seine catches. J Fish Biol. 93:147–152. doi:10.1111/jfb.13646
  • Muška, M., Tušer, M., Frouzová, J., Mrkvička, T., Ricard, D., Seďa, J., Morelli, F., Kubečka, J.: Real-time distribution of pelagic fish: combining hydroacoustics, GIS and spatial modelling at a fine spatial scale. Scientific Reports , 8, 2018, Article number: 5381.
  • Znachor, P., Nedoma, J., Hejzla, J., Seďa, J., Kopáček, J., Boukal, D., Mrkvička T.: Multiple long-term trends and trend reversals dominate environmental conditions in a man-made freshwater reservoir. Science of the Total Environment , 624, 2018, 24-33.
  • Baran R., Jůza, T., Tušer, M., Balk, H., Blabolil P., Čech, M., Draštík, V., Frouzová, J., Jayasinghe A.D., Koliada, I., Mrkvička T., Muška, M., Ricard, D., Sajdlová, Z., Vejřík, L., Kubečka, J.: A novel upward-looking hydroacoustic method for improving pelagic fish surveys. Scientific Reports , 7: 4823, 2017, 11-42. DOI:10.1038/s41598-017-04953-6 1
  • Jošt J., Havlisová H., Mrkvičková I., Bílková Z., Mrkvička T.: Social aspects of dislexia: A case of transparent orthography. in: Dislexia Perspective, Challanges and Treatment Options (Editor: Marilin Frazier, 2016, 11-42.
  • Vašek M., Prchalová M., Říha M., Blabolil P., Čech M., Draštík V., Frouzová J., Jůza T., Kratochvíl M., Muška M., Peterka J., Sajdlová Z., Šmejkal M., Tušer M., Vejřík L., Znachor P., Mrkvička T., Seďa J., Kubečka J.: Fish community response to the longitudinal environmental gradient in Czech deep-valley reservoirs: implications for ecological monitoring and management. Ecological Indicators 63, 2016, 219-230.
  • Blábolil, P. , Ricard D. , Peterka J., Říha, M., Jůza, T., Vašek, M., Prchalová, M., Čech, M., Muška, M., Sed’a, M., Mrkvička, T., Boukal, D., Kubečka, J.: Predicting asp and pikeperch recruitment in a riverine reservoir. Fisheries Research 173, 2016, 45-52.
  • Estlander, S., Nurminen, L., Mrkvička, T., Olin, M., Rask, M. Lehtonen, H.: Sex-dependent responses of perch to changes in water clarity and temperature. Ecology of Freshwater Fish 8, 2014, 1-9.
  • Sajdlová, Z., Draštík, V. Říha, M., Jůza, T., Frouzová, J., Vašek, M., Muška, M., Blabolil, P., Čech, M., Tušer, M., Kratochvíl, M., Peterka, J. Mrkvička, T., Balk, H., Kubecka, J.: Fish behaviour in response to a midwater trawl footrope in temperate reservoirs. Fisheries Research 172, 2015, 105-113.
  • Baran, R., Kubečka, J., Kubín, M., Lojkásek, B., Mrkvička, T., Ricard, D. and Rulík, M.: Abundance of Cottus poecilopus is influenced by O2 saturation, food density and brown trout in three tributaries of the Rožnovská Bečva River, Czech Republic. Journal of Fish Biology 86, 2015, 805-811.
  • Říha M., Ricard D., Vašek M., Prchalová M., Mrkvička T., Jůza T. Čech M., Draštík V., Muška M., Kratochvíl M., Peterka J., Tušer M., Seďa J., Blabolil P., Bláha M., Wanzenböck J., Kubečka J.: Patterns in diel habitat use of fish covering the littoral and pelagic zones in a reservoir. Hydrobiologia 747, 2015, 111-131.
  • Tušer, M., Frouzová, J., Balk, H., Muška, M., Mrkvička, T., Kubečka, J.: Evaluation of potential bias in observing fish by a DIDSON acoustic camera. Fisheries Research 155, 2014, 114-121.
  • Jůza, T. Mrkvička, T., Blabolil1, P., Čech, M., Peterka, J., Vašek, M., Kubečka, J.: Occurrence of age-0 dwarf pikeperch in late summer – an overlooked phenomenon in reservoirs, Journal of Fish Biology 83, 2013, 1444–1452.
  • Říha M., Hladík M., Mrkvička T., Prchalová M., Čech M., Draštík V., Frouzová J., Jůza T., Kratochvíl M., Peterka J., Vašek M., Kubečka J.: Post-spawning dispersal of tributary spawning fish species to a reservoir system, Folia Zool. 62/1, 2013, 1-13.
  • Muška M., Tušer M., Frouzová J., Draštík V., Čech M., Jůza T., Kratochvíl M., Mrkvička T., Peterka J., Prchalová M., Říha M., Vašek M., Kubečka J.: To migrate, or not to migrate: partial diel horizontal migration of fish in a temperate freshwater reservoir, Hydrobiologia 707, 2013, 17-28.
  • Prchalová M., Kubečka J., Říha M., Čech M., Jůza T., Ketelaars Henk A.M., Kratochvíl M., Mrkvička T., Peterka J., Vašek M., Wagenvoort Arco J.: Eel attacks—A new tool for assessing European eel (Anguilla anguilla) abundance and distribution patterns with gillnet sampling, Lymnologia 43, 2013, 194-202.
  • Tušer M., Prchalová M., Mrkvička T., Frouzová J., Čech M., Peterka J., Jůza T., Vašek M., Kratochvíl M., Draštík V., Kubečka J.: A simple method to correct the results of acoustic surveys for fish hidden in the dead zone, J. Appl. Ichthyol. 29, 2013, 358-363.
  • Vašek M., Prchalová M., Peterka J., Ketelaars H.A.M., Wagenvoort A.J., Čech M., Draštík V., Říha M., Jůza T., Kratochvíl M., Mrkvička T., Blabolil P., Boukal D.S., Duras J., Kubečka J.: The utility of predatory fish in biomanipulation of deep reservoirs. Ecological Engineering 52, 2013, 104-111.
  • Jůza T., Frouzová J., Bramick U., Mrkvička T., Kubečka J.: The vertical distribution of fish in the open water area of a deep temperate mesotrophic lake assessed by hydroacoustics and midwater trawling, Internat. Rev. Hydrobiol. 97/6, 2012, 509-525.
  • Kratochvíl M., Mrkvička T., Vašek M., Peterka J., Čech M., Draštík V., Jůza T., Matěna J., Muška M., Seďa J., Znachor P., Kubečka J.: Littoral age 0+ fish distribution in relation to multi-scale spatial heterogeneity of a deep-valley reservoir, Hydrobiologia 696, 2012, 185-198.
  • Říha M., Jůza T., Prchalová M., Mrkvička T., Čech M., Draštík V., Muška M., Kratochvíl M., Peterka J., Tušer M., Vašek M., Kubečka J.: The size selectivity of the main body of a sampling pelagic pair trawl in freshwater reservoirs during the night, Fisheries Research 127-128, 2012, 56-60.
  • Tušer M., Balk H., Mrkvička T., Frouzová J., Čech M., Muška M., Kubečka J.: Validation of current acoustic dead-zone estimation methods in lakes with strongly sloped bottom, LIMNOLOGY and OCEANOGRAPHY: METHODS 9, 2011, 507-514.
  • Říha M., Kubečka J., Prchalová M., Mrkvička T., Čech M., Draštík V., Frouzová J., Hohausová E., Jůza T., Kratochvíl M., Peterka J., Tušer M., Vašek M.: The influence of diel period on fish assemblage in the unstructured littoral of reservoirs, Fisheries Management and Ecology 18, 2011, 339-347.
  • Frouzová J., Kubečka J., Mrkvička T.: Differences in acoustic target strength pattern between fish with one- and two-chambered swimbladder during rotation in the horizontal plane, Fisheries Research 109, 2011, 114-118.
  • M. Prchalová, T. Mrkvička, J. Kubečka, J. Peterka, M. Čech, M. Muška, M. Kratochvíl, M. Vašek: Fish activity as determined by gillnet catch: a comparison of two reservoirs of different turbidity, Fisheries Research 102, 2010, 291-296.
  • V. Draštík, J. Kubečka, ...., T. Mrkvička: Hydroacustics estimates of fish stocks in temperate reservoirs: day or night surveys, Aquat. Living Resour 22, 2009, 69-77.
  • M. Říha, J. Kubečka, M. Vašek, J. Seďa, T. Mrkvička, M. Prchalová, …: Long term development of fish populations in the Římov reservoir, Fisheries Managment and Ecology 16, 2009, 121-129.
  • M. Vašek, J. Kubečka, M. Čech, V. Draštík, J. Matěna, T. Mrkvička, J. Peterka and M. Prchalová: Diel variation in gillnet catches and vertical distribution of pelagic fishes in a stratified European reservoir, Fisheries Research 96/1, 2009, 64-69.
  • M. Prchalová, J. Kubečka, M. Říha, T. Mrkvička, … : Size selectivity of standardized multimesh gillnets in sampling coarse European species, Fisheries Research 96/1, 2009, 51-57.
  • M. Říha, J. Kubečka, T. Mrkvička, M. Prchalová, …: Dependence of beach seine net efficiency on net length and diel period, Aquat. Living Resour 21, 2008, 411-418 .
  • M. Hladík, J. Kubečka, T. Mrkvička, … : Effects of the construction of a reservoir on the fish assemblage in an inflow river, Czech J. Anim. Sci. 53, 2008, 537-547.

Proceedings papers:

  • Tlustý P., Mrkvička T., Šulista M.: The Annual Percentage Rate - Complexness and Ambiguity, in: PROCEEDINGS OF THE 9TH INTERNATIONAL SCIENTIFIC CONFERENCE INPROFORUM: COMMON CHALLENGES - DIFFERENT SOLUTIONS - MUTUAL DIALOGUE Univ South Bohemia Ceske Budejovice, Fac Econ, Ceske Budejovice, CZECH REPUBLIC, 2015, pages 171-174.
  • Berková I., Mrkvička T.: Spatial statistics: Recognition of Spatial Relationships of Companies, in: PROCEEDINGS OF THE 9TH INTERNATIONAL SCIENTIFIC CONFERENCE INPROFORUM: COMMON CHALLENGES - DIFFERENT SOLUTIONS - MUTUAL DIALOGUE Univ South Bohemia Ceske Budejovice, Fac Econ, Ceske Budejovice, CZECH REPUBLIC, 2015, pages 129-133.
  • Mrkvička T., Lauschmann H.: Circumference in Binary Images: Comparison of Continuous Representation and Global Stereological Estimation Methods, Stereology and Image Analysis. Ecs10 - Proceedings of the 10th European Congress of ISS, (V.Capasso et al. Ed.), The MIRIAM Project Series, Vol. 4, ESCULAPIO Pub. Co., Bologna, Italy, 2009.
  • Burianová V., Mrkvička T.: Portál pro učitele a studenty matematiky s využitím WebMathematica, Sborník příspěvků 3.konference Užití počítačů ve výuce matematiky, Jihočeská universita, České Budějovice (2007), str 21 - 25.
  • Mrkvička T., Chadoeuf J.: Can the use of a local parametric model improve the estimation of the mean in the non-stationary mark distribution of a marked Poisson point process?, in: Proceedings of International Conference on Stereology, Spatial Statistics and Stochastic Geometr 2006, Union of Czech Mathematicians and Physicists, Prague (2006), pages 185-190.
  • Mrkvička T.: Estimation of length density for parameterized Boolean Segment Process, Department of Mathematics Report Series 13, 2005, 115 - 118.
  • Švadlenková M., Sedlářová B., Mrkvička T.: Biomonitoring radioaktivity řeky Vltavy v souvislosti s provozem JETE, sborník k XVIII. mezinárodní konferenci Radionuklidy a ionizující záření ve vodním hospodářství Jihočeská universita, České Budějovice (2004), str 37 - 42.
  • Mrkvička T.: An Example of the Use of the Computer in the Science, Department of Mathematics Report Series 11, 2003, 275-286.
  • Tomáš Mrkvička: Estimation variances for Poisson process of compact sets, in: Proceedings of the Week of Doctoral Students 2000, Part I, Faculty of Mathematics and Physics, Charles University, Prague (2000), pages 52-57.

Invited conferences talks:

  • Mrkvička T.: Inference for complex models of points aggregation, with different types of inhomogeneity, abstract in: Workshop on probability and statistical modeling, and applications: 9th Smögen Workshops , University of Gothenburg, Sweden (2018).
  • Mrkvička T.: A new method for multiple testing in permutation inference for the General linear model, abstract in: Workshop: Modern Statistics for Complex Data Structures , KAUST, Saudská Arábie (2017).
  • Mrkvička T.: Testing in Spatial Statistics, invited session in: Spatial Statistics , Avignon, Francie (2015).
  • Mrkvička T.: General solution for multiple testing probolem in Monte Carlo tests, abstract in: SYMPOSIUM IN HONOUR OF ADRIAN BADDELEY , Aarhus, Denmark (2013), p. 3.

Talks at conferences:

  • Mrkvička T.: Revisiting the random shift approach for testing in spatial statistics, Spatial Statistics Conference, Barcelona, Spain (2019).
  • Mrkvička T.: Revisiting the random shift approach for testing in spatial statistics, Point processes in space, time, and beyond, Skagen, Denmark (2019).
  • Mrkvička T.: Refinements of the global envelope tests, with application on the General linear model of neuroimage data, abstract in: Book of Abstracts of 8th International Conference on Stereology, Spatial Statistics and Stochastic Geometry, Prague, Czech Republic (2018).
  • Mrkvička T.: Refinements of the global envelope tests, with application on the General linear model of neuroimage data, abstract in: Mini-proceedings of 12th French-Danish Workshop on Spatial Statistics and Image Analysis in Biology, University of Aalborg, Danmark (2018).
  • Mrkvička T.: Inference for complex Cox process models, with different types of inhomogeneity and aggregation, Spatial Statistics Conference, Lancaster, UK (2017).
  • Mrkvička T.: An ANOVA test for functional data with graphical interpretation, extended abstract in: CompStat2016 , Oviedo, Spain (2016).
  • Mrkvička T.: Monte Carlo testing in Spatial Statistics - Global envelope tests, abstract in: AU Workshop SGSA , Sandbjerg, Denmark (2016).
  • Mrkvička T.: Doubly Inhomogeneous Cluster Point Processes, extended abstract in: Mini-proceedings of 11th French-Danish Workshop on Spatial Statistics and Image Analysis in Biology, University of Rennes, France (2016).
  • Mrkvička T.: Global envelope tests II, extended abstract in: Mini-proceedings of 10th French-Danish Workshop on Spatial Statistics and Image Analysis in Biology, University of Aalborg (2014), p. 1-2.
  • Mrkvička T.: New exact method for envelope testing, extended abstract in: Mini-proceedings of 17th Workshop on Stochastic Geometry and Image Analysis, Toruň, Poland (2013), p. 36.
  • Mrkvička T.: Checking type of inhomogeneity for Neyman-Scott point processes, abstract in: University of Miami Spatial Statistics Conference 2012, University of Miami (2012).
  • Mrkvička T.: Goodness-of-fit test of the mark distribution in a point process with position dependent marks, extended abstract in: Book of Abstracts of 7th International Conference on Stereology, Spatial Statistics and Stochastic Geometry, Prague, Czech Republic (2012), p. 53-54.
  • Mrkvička T.: Two step estimation for Neyman-Scott point process with inhomogeneous cluster centers, extended abstract in: Mini-proceedings of 9th French-Danish Workshop on Spatial Statistics and Image Analysis in Biology, University of Avignon (2012), p. 1-2.
  • Mrkvička T.: Two step estimation for Neyman-Scott point process with inhomogeneous cluster centers, extended abstract in: Mini-proceedings of 16th Workshop on Stochastic Geometry and Image Analysis, Sandbjer Estate, Sonderborg (2011), p. 31.
  • Mrkvička T.: Goodness-of-fit test of the mark distribution in a point process with position dependent marks, extended abstract in: Mini-proceedings of ASC2010, Fremantle, Western Australia (2010), p. 171.
  • Mrkvička T.: Goodness-of-fit test of the mark distribution in a point process with position dependent marks, extended abstract in: Mini-proceedings of 8th French-Danish Workshop on Spatial Statistics and Image Analysis in Biology, University of Copenhagen (2010), p. 1-4.
  • Mrkvička T.: Normal envelopes in goodness of fit testing, extended abstract in: Mini-proceedings of 15th Workshop on Stochastic Geometry and Image Analysis, Heinrich-Fabri-Institute, Blaubeuren (2009), p. 49.
  • Mrkvička T.: On Testing of General Random Closed Set Model Hypothesis, extended abstract in: Mini-proceedings of 14th Workshop on Stochastic Geometry and Image Analysis, Friedrich-Schiller-University of Jena (2007), p. 40.
  • Mrkvička T.: estimation of intrinsic volume densities of stationary random closed sets, extended abstract in: Mini-proceedings of Stochastic Geometry and its Applications, University of Bern (2005), p. 23.
  • Mrkvička T.: Optimization of Linear, Unbiased Estimators of Point Process Intensity, extended abstract in: Mini-proceedings of 12th Workshop on Stochastic Geometry and Image Analysis, Charles University Prague (2003), p. 26.
  • Mrkvička T.: Estimation variances for Poisson process of compact sets, extended abstract in: Mini-proceedings of Workshop on Computational Stochastics, S. Asmussen and E. B. Vedel-Jensen eds., University of Aarhus, Aarhus (1999), p. 22.

Grants:

  • Klebanov L., Helisová K., Mrkvička T.: Nové přístupy k modelování a statistice náhodných množin GA ČR 19-04412S, 2019 - 2021. - spoluřešitel
  • Klebanov L., Mrkvička T.: Prostorová geometrická statistika náhodných množin v eukleidovských prostorech GA ČR 16-03708S, 2016 - 2018. - spoluřešitel
  • Stehlík M., Mrkvička T.: Testing and modelling of cancer, AKTION Czech Republic-Austria, Project 58p5, 2010-2011.
  • Beneš V., Mrkvička T.: Stochastická geometrie – nehomogenita, kótování, dynamika a stereologie GA ČR P201/10/0472, 2010 - 2014. - spoluřešitel
  • Mrkvička T.: Konstrukce statistických testů v prostorové statistice, Juniorský grant - GA AV ČR KJB101420801, 2008-2011.
  • Mrkvička T.: Optimalizace odhadů charakteristik bodových procesů v Rd, Post doktorský grant - GA ČR 201/03/D062, 2003-2006.

PhD work

  • Modely náhodných množin a jejich statistická analýza.

Diploma work

  • Náhodná pole a náhodné uzavřené množiny v Rd.

 

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